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Cluster: SW014_11_sub_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39435 k141_39435_124 132302 134491 - GH36
TC k141_39435 k141_39435_125 134522 135343 - 3.A.1.1.45
TC k141_39435 k141_39435_126 135343 136215 - 3.A.1.1.7
STP k141_39435 k141_39435_127 136218 137549 - SBP_bac_1
TC k141_39435 k141_39435_128 137748 139532 + 8.A.59.2.1
TF k141_39435 k141_39435_129 139513 140925 + HTH_AraC
pfam k141_39435 k141_39435_130 140984 141829 - AP_endonuc_2
CAZyme k141_39435 k141_39435_131 141887 142909 - GH179
TC k141_39435 k141_39435_132 142921 143865 - 3.A.1.2.15
TC k141_39435 k141_39435_133 143855 145378 - 3.A.1.2.19
Gene ID: k141_39435_124
Type: CAZyme
Location: 132302 - 134491 (-)
Gene ID: k141_39435_125
Type: TC
Location: 134522 - 135343 (-)
Gene ID: k141_39435_126
Type: TC
Location: 135343 - 136215 (-)
Gene ID: k141_39435_127
Type: STP
Location: 136218 - 137549 (-)
Gene ID: k141_39435_128
Type: TC
Location: 137748 - 139532 (+)
Gene ID: k141_39435_129
Type: TF
Location: 139513 - 140925 (+)
Gene ID: k141_39435_130
Type: pfam
Location: 140984 - 141829 (-)
Gene ID: k141_39435_131
Type: CAZyme
Location: 141887 - 142909 (-)
Gene ID: k141_39435_132
Type: TC
Location: 142921 - 143865 (-)
Gene ID: k141_39435_133
Type: TC
Location: 143855 - 145378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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