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Cluster: SW014_11_sub_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65772 k141_65772_85 99247 100803 + 3.A.1.121.4
CAZyme k141_65772 k141_65772_86 100969 102051 - GH179
CAZyme k141_65772 k141_65772_87 102123 103169 - GH179
pfam k141_65772 k141_65772_88 103199 104170 - AP_endonuc_2
pfam k141_65772 k141_65772_89 104181 105017 - AP_endonuc_2
TC k141_65772 k141_65772_90 105037 105924 - 3.A.1.1.29
TC k141_65772 k141_65772_91 105943 106884 - 3.A.1.1.9
Gene ID: k141_65772_85
Type: TC
Location: 99247 - 100803 (+)
Gene ID: k141_65772_86
Type: CAZyme
Location: 100969 - 102051 (-)
Gene ID: k141_65772_87
Type: CAZyme
Location: 102123 - 103169 (-)
Gene ID: k141_65772_88
Type: pfam
Location: 103199 - 104170 (-)
Gene ID: k141_65772_89
Type: pfam
Location: 104181 - 105017 (-)
Gene ID: k141_65772_90
Type: TC
Location: 105037 - 105924 (-)
Gene ID: k141_65772_91
Type: TC
Location: 105943 - 106884 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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