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Cluster: SW014_11_sub_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_65772 k141_65772_4 3600 4688 - GH105
pfam k141_65772 k141_65772_5 4786 5064 - SpoIIID
pfam k141_65772 k141_65772_6 5196 6323 - MR_MLE_C
CAZyme k141_65772 k141_65772_7 6307 7974 - CBM91 | GH43_12
CAZyme k141_65772 k141_65772_8 7961 9985 - PL11
STP k141_65772 k141_65772_9 10096 11478 - SBP_bac_1
TC k141_65772 k141_65772_10 11602 12444 - 3.A.1.1.44
TC k141_65772 k141_65772_11 12444 13361 - 3.A.1.1.7
Gene ID: k141_65772_4
Type: CAZyme
Location: 3600 - 4688 (-)
Gene ID: k141_65772_5
Type: pfam
Location: 4786 - 5064 (-)
Gene ID: k141_65772_6
Type: pfam
Location: 5196 - 6323 (-)
Gene ID: k141_65772_7
Type: CAZyme
Location: 6307 - 7974 (-)
Gene ID: k141_65772_8
Type: CAZyme
Location: 7961 - 9985 (-)
Gene ID: k141_65772_9
Type: STP
Location: 10096 - 11478 (-)
Gene ID: k141_65772_10
Type: TC
Location: 11602 - 12444 (-)
Gene ID: k141_65772_11
Type: TC
Location: 12444 - 13361 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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