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Cluster: SW014_11_sub_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_75856 k141_75856_159 187263 189383 - GH127
TC k141_75856 k141_75856_160 189419 190261 - 3.A.1.1.41
TC k141_75856 k141_75856_161 190263 191183 - 3.A.1.1.25
STP k141_75856 k141_75856_162 191290 192576 - SBP_bac_1
TF k141_75856 k141_75856_163 192672 194177 - HTH_AraC
TC k141_75856 k141_75856_164 194197 195984 - 8.A.59.2.1
pfam k141_75856 k141_75856_165 196236 197180 - ROK
pfam k141_75856 k141_75856_166 197208 198497 - DUF5711
CAZyme k141_75856 k141_75856_167 198615 200078 - CBM50
pfam k141_75856 k141_75856_168 200138 200869 - DUF1256
pfam k141_75856 k141_75856_169 200923 201846 - NTP_transferase
TC k141_75856 k141_75856_170 201976 203505 - 3.D.10.1.4
Gene ID: k141_75856_159
Type: CAZyme
Location: 187263 - 189383 (-)
Gene ID: k141_75856_160
Type: TC
Location: 189419 - 190261 (-)
Gene ID: k141_75856_161
Type: TC
Location: 190263 - 191183 (-)
Gene ID: k141_75856_162
Type: STP
Location: 191290 - 192576 (-)
Gene ID: k141_75856_163
Type: TF
Location: 192672 - 194177 (-)
Gene ID: k141_75856_164
Type: TC
Location: 194197 - 195984 (-)
Gene ID: k141_75856_165
Type: pfam
Location: 196236 - 197180 (-)
Gene ID: k141_75856_166
Type: pfam
Location: 197208 - 198497 (-)
Gene ID: k141_75856_167
Type: CAZyme
Location: 198615 - 200078 (-)
Gene ID: k141_75856_168
Type: pfam
Location: 200138 - 200869 (-)
Gene ID: k141_75856_169
Type: pfam
Location: 200923 - 201846 (-)
Gene ID: k141_75856_170
Type: TC
Location: 201976 - 203505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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