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Cluster: SW014_11_sub_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_42811 k141_42811_150 160937 162643 + GT2
pfam k141_42811 k141_42811_151 162714 163613 + MptE-like
CAZyme k141_42811 k141_42811_152 163610 164650 + GT2
pfam k141_42811 k141_42811_153 164669 165340 + CTP_transf_3
CAZyme k141_42811 k141_42811_154 165340 166551 + GT4
pfam k141_42811 k141_42811_155 166608 167606 + Radical_SAM | SPASM
STP k141_42811 k141_42811_156 167629 169368 + EAL | GGDEF | Response_reg
TC k141_42811 k141_42811_157 169411 170814 + 9.B.18.1.2
CAZyme k141_42811 k141_42811_158 170915 172042 - GH105
TC k141_42811 k141_42811_159 172474 173823 + 3.A.1.1.11
TC k141_42811 k141_42811_160 173904 174797 + 3.A.1.1.11
TC k141_42811 k141_42811_161 174804 175655 + 3.A.1.1.11
CAZyme k141_42811 k141_42811_162 175834 177432 + GH28
Gene ID: k141_42811_150
Type: CAZyme
Location: 160937 - 162643 (+)
Gene ID: k141_42811_151
Type: pfam
Location: 162714 - 163613 (+)
Gene ID: k141_42811_152
Type: CAZyme
Location: 163610 - 164650 (+)
Gene ID: k141_42811_153
Type: pfam
Location: 164669 - 165340 (+)
Gene ID: k141_42811_154
Type: CAZyme
Location: 165340 - 166551 (+)
Gene ID: k141_42811_155
Type: pfam
Location: 166608 - 167606 (+)
Gene ID: k141_42811_156
Type: STP
Location: 167629 - 169368 (+)
Gene ID: k141_42811_157
Type: TC
Location: 169411 - 170814 (+)
Gene ID: k141_42811_158
Type: CAZyme
Location: 170915 - 172042 (-)
Gene ID: k141_42811_159
Type: TC
Location: 172474 - 173823 (+)
Gene ID: k141_42811_160
Type: TC
Location: 173904 - 174797 (+)
Gene ID: k141_42811_161
Type: TC
Location: 174804 - 175655 (+)
Gene ID: k141_42811_162
Type: CAZyme
Location: 175834 - 177432 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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