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Cluster: SW014_11_sub_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_32937 k141_32937_34 39675 41483 - 8.A.59.2.1
STP k141_32937 k141_32937_35 41687 43048 + SBP_bac_1
TC k141_32937 k141_32937_36 43145 44038 + 3.A.1.1.11
TC k141_32937 k141_32937_37 44041 44886 + 3.A.1.1.11
pfam k141_32937 k141_32937_38 44891 45823 + Amidohydro_2
CAZyme k141_32937 k141_32937_39 45813 47213 + GH4
TC k141_32937 k141_32937_40 47461 48327 + 3.A.1.122.7
pfam k141_32937 k141_32937_41 48305 50140 + CARDB
TC k141_32937 k141_32937_42 50127 51530 + 3.A.1.122.2
pfam k141_32937 k141_32937_43 51781 52494 + IMP_cyclohyd
pfam k141_32937 k141_32937_44 52514 53692 + AICARFT_IMPCHas
TC k141_32937 k141_32937_45 53843 55180 + 2.A.66.1.25
pfam k141_32937 k141_32937_46 55318 57186 + Sulfatase
TF k141_32937 k141_32937_47 57270 57902 + Trp_repressor
CAZyme k141_32937 k141_32937_48 58304 59644 + GH3
Gene ID: k141_32937_34
Type: TC
Location: 39675 - 41483 (-)
Gene ID: k141_32937_35
Type: STP
Location: 41687 - 43048 (+)
Gene ID: k141_32937_36
Type: TC
Location: 43145 - 44038 (+)
Gene ID: k141_32937_37
Type: TC
Location: 44041 - 44886 (+)
Gene ID: k141_32937_38
Type: pfam
Location: 44891 - 45823 (+)
Gene ID: k141_32937_39
Type: CAZyme
Location: 45813 - 47213 (+)
Gene ID: k141_32937_40
Type: TC
Location: 47461 - 48327 (+)
Gene ID: k141_32937_41
Type: pfam
Location: 48305 - 50140 (+)
Gene ID: k141_32937_42
Type: TC
Location: 50127 - 51530 (+)
Gene ID: k141_32937_43
Type: pfam
Location: 51781 - 52494 (+)
Gene ID: k141_32937_44
Type: pfam
Location: 52514 - 53692 (+)
Gene ID: k141_32937_45
Type: TC
Location: 53843 - 55180 (+)
Gene ID: k141_32937_46
Type: pfam
Location: 55318 - 57186 (+)
Gene ID: k141_32937_47
Type: TF
Location: 57270 - 57902 (+)
Gene ID: k141_32937_48
Type: CAZyme
Location: 58304 - 59644 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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