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Cluster: SW014_11_sub_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22820 k141_22820_63 61085 62974 - GH127
TC k141_22820 k141_22820_64 63015 63839 - 3.A.1.1.48
TC k141_22820 k141_22820_65 63853 64737 - 3.A.1.1.25
TC k141_22820 k141_22820_66 64788 66062 - 3.A.1.1.3
TF k141_22820 k141_22820_67 66262 67152 + HTH_AraC | HTH_AraC
TC k141_22820 k141_22820_68 67259 69046 - 3.A.1.106.9
TC k141_22820 k141_22820_69 69043 70794 - 3.A.1.21.1
Gene ID: k141_22820_63
Type: CAZyme
Location: 61085 - 62974 (-)
Gene ID: k141_22820_64
Type: TC
Location: 63015 - 63839 (-)
Gene ID: k141_22820_65
Type: TC
Location: 63853 - 64737 (-)
Gene ID: k141_22820_66
Type: TC
Location: 64788 - 66062 (-)
Gene ID: k141_22820_67
Type: TF
Location: 66262 - 67152 (+)
Gene ID: k141_22820_68
Type: TC
Location: 67259 - 69046 (-)
Gene ID: k141_22820_69
Type: TC
Location: 69043 - 70794 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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