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Cluster: SW014_11_sub_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_49008 k141_49008_33 33371 34261 + 3.A.1.1.42
TC k141_49008 k141_49008_34 34261 35136 + 3.A.1.1.45
CAZyme k141_49008 k141_49008_35 35211 37313 + GH36
NULL(UNKNOWN) k141_49008 k141_49008_36 37586 38080 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_49008 k141_49008_37 38092 39777 - PucR | HTH_30
TC k141_49008 k141_49008_38 40071 41432 + 9.A.5.1.1
NULL(UNKNOWN) k141_49008 k141_49008_39 41450 41641 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_49008 k141_49008_40 41843 43360 + 2.A.118.1.6
Gene ID: k141_49008_33
Type: TC
Location: 33371 - 34261 (+)
Gene ID: k141_49008_34
Type: TC
Location: 34261 - 35136 (+)
Gene ID: k141_49008_35
Type: CAZyme
Location: 35211 - 37313 (+)
Gene ID: k141_49008_36
Type:
Location: 37586 - 38080 (-)
Gene ID: k141_49008_37
Type: pfam
Location: 38092 - 39777 (-)
Gene ID: k141_49008_38
Type: TC
Location: 40071 - 41432 (+)
Gene ID: k141_49008_39
Type:
Location: 41450 - 41641 (+)
Gene ID: k141_49008_40
Type: TC
Location: 41843 - 43360 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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