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Cluster: SW014_11_sub_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78448 k141_78448_139 157968 159998 - 9.A.8.1.10
STP k141_78448 k141_78448_140 159995 160459 - FeoA
STP k141_78448 k141_78448_141 160532 161152 - TetR_N
TC k141_78448 k141_78448_142 161282 163189 - 3.A.3.6.16
TC k141_78448 k141_78448_143 163619 166255 + 3.A.3.4.1
pfam k141_78448 k141_78448_144 166563 167405 - DUF218
CAZyme k141_78448 k141_78448_145 167620 169062 - GH1
pfam k141_78448 k141_78448_146 169255 169635 - PTS_IIA
TC k141_78448 k141_78448_147 169649 170890 - 4.A.3.2.2
Gene ID: k141_78448_139
Type: TC
Location: 157968 - 159998 (-)
Gene ID: k141_78448_140
Type: STP
Location: 159995 - 160459 (-)
Gene ID: k141_78448_141
Type: STP
Location: 160532 - 161152 (-)
Gene ID: k141_78448_142
Type: TC
Location: 161282 - 163189 (-)
Gene ID: k141_78448_143
Type: TC
Location: 163619 - 166255 (+)
Gene ID: k141_78448_144
Type: pfam
Location: 166563 - 167405 (-)
Gene ID: k141_78448_145
Type: CAZyme
Location: 167620 - 169062 (-)
Gene ID: k141_78448_146
Type: pfam
Location: 169255 - 169635 (-)
Gene ID: k141_78448_147
Type: TC
Location: 169649 - 170890 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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