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Cluster: SW014_11_sub_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78448 k141_78448_55 65426 66769 - 2.A.66.1.33
TF k141_78448 k141_78448_56 66976 67896 + HTH_AraC
CAZyme k141_78448 k141_78448_57 68072 70015 - GH127
TC k141_78448 k141_78448_58 70028 70861 - 3.A.1.1.41
TC k141_78448 k141_78448_59 70861 71751 - 3.A.1.1.17
STP k141_78448 k141_78448_60 71888 73144 - SBP_bac_1
TC k141_78448 k141_78448_61 73275 74540 - 3.A.1.1.2
TF k141_78448 k141_78448_62 74573 76096 - HTH_AraC | HTH_AraC
TC k141_78448 k141_78448_63 76107 77918 - 8.A.59.2.1
Gene ID: k141_78448_55
Type: TC
Location: 65426 - 66769 (-)
Gene ID: k141_78448_56
Type: TF
Location: 66976 - 67896 (+)
Gene ID: k141_78448_57
Type: CAZyme
Location: 68072 - 70015 (-)
Gene ID: k141_78448_58
Type: TC
Location: 70028 - 70861 (-)
Gene ID: k141_78448_59
Type: TC
Location: 70861 - 71751 (-)
Gene ID: k141_78448_60
Type: STP
Location: 71888 - 73144 (-)
Gene ID: k141_78448_61
Type: TC
Location: 73275 - 74540 (-)
Gene ID: k141_78448_62
Type: TF
Location: 74573 - 76096 (-)
Gene ID: k141_78448_63
Type: TC
Location: 76107 - 77918 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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