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Cluster: SW014_11_sub_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78448 k141_78448_14 15095 16483 + 2.A.66.1.32
TC k141_78448 k141_78448_15 16499 17083 + 2.A.115.2.14
pfam k141_78448 k141_78448_16 17268 18206 + Choline_bind_1 | Choline_bind_3
TC k141_78448 k141_78448_17 18308 20059 - 8.A.59.2.1
TF k141_78448 k141_78448_18 20056 20877 - HTH_AraC
TC k141_78448 k141_78448_19 20890 21714 - 3.A.1.1.41
TC k141_78448 k141_78448_20 21729 22610 - 3.A.1.1.20
STP k141_78448 k141_78448_21 22668 23993 - SBP_bac_1
CAZyme k141_78448 k141_78448_22 24010 26034 - GH42
STP k141_78448 k141_78448_23 26384 28318 - EAL | GGDEF
TC k141_78448 k141_78448_24 28538 30520 + 3.A.10.1.5
CAZyme k141_78448 k141_78448_25 30630 32057 - GH1
TC k141_78448 k141_78448_26 32079 33938 - 4.A.1.2.11
Gene ID: k141_78448_14
Type: TC
Location: 15095 - 16483 (+)
Gene ID: k141_78448_15
Type: TC
Location: 16499 - 17083 (+)
Gene ID: k141_78448_16
Type: pfam
Location: 17268 - 18206 (+)
Gene ID: k141_78448_17
Type: TC
Location: 18308 - 20059 (-)
Gene ID: k141_78448_18
Type: TF
Location: 20056 - 20877 (-)
Gene ID: k141_78448_19
Type: TC
Location: 20890 - 21714 (-)
Gene ID: k141_78448_20
Type: TC
Location: 21729 - 22610 (-)
Gene ID: k141_78448_21
Type: STP
Location: 22668 - 23993 (-)
Gene ID: k141_78448_22
Type: CAZyme
Location: 24010 - 26034 (-)
Gene ID: k141_78448_23
Type: STP
Location: 26384 - 28318 (-)
Gene ID: k141_78448_24
Type: TC
Location: 28538 - 30520 (+)
Gene ID: k141_78448_25
Type: CAZyme
Location: 30630 - 32057 (-)
Gene ID: k141_78448_26
Type: TC
Location: 32079 - 33938 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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