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Cluster: SW014_11_sub_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38388 k141_38388_56 58797 59675 + 3.A.1.1.20
TC k141_38388 k141_38388_57 59678 60544 + 3.A.1.1.18
CAZyme k141_38388 k141_38388_58 60590 61951 + GH32
STP k141_38388 k141_38388_59 62209 62721 + LysR_substrate
TC k141_38388 k141_38388_60 62874 65237 + 2.A.16.2.2
TC k141_38388 k141_38388_61 65439 66779 + 2.A.66.1.7
TF k141_38388 k141_38388_62 66856 67770 - HTH_1
CAZyme k141_38388 k141_38388_63 68011 69339 + GH28
TC k141_38388 k141_38388_64 69443 70351 + 3.A.1.5.20
TC k141_38388 k141_38388_65 70364 71218 + 3.A.1.5.20
TC k141_38388 k141_38388_66 71232 73271 + 3.A.1.5.26
TC k141_38388 k141_38388_67 73295 74944 + 3.A.1.5.27
pfam k141_38388 k141_38388_68 74973 75953 + UxuA
CAZyme k141_38388 k141_38388_69 75967 77082 + PL38
Gene ID: k141_38388_56
Type: TC
Location: 58797 - 59675 (+)
Gene ID: k141_38388_57
Type: TC
Location: 59678 - 60544 (+)
Gene ID: k141_38388_58
Type: CAZyme
Location: 60590 - 61951 (+)
Gene ID: k141_38388_59
Type: STP
Location: 62209 - 62721 (+)
Gene ID: k141_38388_60
Type: TC
Location: 62874 - 65237 (+)
Gene ID: k141_38388_61
Type: TC
Location: 65439 - 66779 (+)
Gene ID: k141_38388_62
Type: TF
Location: 66856 - 67770 (-)
Gene ID: k141_38388_63
Type: CAZyme
Location: 68011 - 69339 (+)
Gene ID: k141_38388_64
Type: TC
Location: 69443 - 70351 (+)
Gene ID: k141_38388_65
Type: TC
Location: 70364 - 71218 (+)
Gene ID: k141_38388_66
Type: TC
Location: 71232 - 73271 (+)
Gene ID: k141_38388_67
Type: TC
Location: 73295 - 74944 (+)
Gene ID: k141_38388_68
Type: pfam
Location: 74973 - 75953 (+)
Gene ID: k141_38388_69
Type: CAZyme
Location: 75967 - 77082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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