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Cluster: SW014_11_sub_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_49786 k141_49786_5 9265 10137 + 3.A.1.1.46
TC k141_49786 k141_49786_6 10130 10972 + 3.A.1.1.44
CAZyme k141_49786 k141_49786_7 10990 12636 + CBM91 | GH43_12
TF k141_49786 k141_49786_8 12799 13539 + GntR
pfam k141_49786 k141_49786_9 13706 14449 + Amidohydro_2
TC k141_49786 k141_49786_10 14469 14864 + 4.A.6.1.16
pfam k141_49786 k141_49786_11 15023 16123 + Amino_oxidase | GLF | NAD_binding_8
CAZyme k141_49786 k141_49786_12 16145 17272 + GT2
CAZyme k141_49786 k141_49786_13 17277 18317 + GT2
TC k141_49786 k141_49786_14 18369 19823 + 2.A.66.2.2
peptidase k141_49786 k141_49786_15 19905 21437 - C82.UNA
CAZyme k141_49786 k141_49786_16 21599 22621 + GT8
CAZyme k141_49786 k141_49786_17 22636 23532 + GT2
pfam k141_49786 k141_49786_18 23555 24670 + DegT_DnrJ_EryC1 | Beta_elim_lyase
pfam k141_49786 k141_49786_19 24693 25706 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
CAZyme k141_49786 k141_49786_20 25732 26418 + GT2
NULL(UNKNOWN) k141_49786 k141_49786_21 26482 27747 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_49786 k141_49786_22 27728 28696 + GT2
Gene ID: k141_49786_5
Type: TC
Location: 9265 - 10137 (+)
Gene ID: k141_49786_6
Type: TC
Location: 10130 - 10972 (+)
Gene ID: k141_49786_7
Type: CAZyme
Location: 10990 - 12636 (+)
Gene ID: k141_49786_8
Type: TF
Location: 12799 - 13539 (+)
Gene ID: k141_49786_9
Type: pfam
Location: 13706 - 14449 (+)
Gene ID: k141_49786_10
Type: TC
Location: 14469 - 14864 (+)
Gene ID: k141_49786_11
Type: pfam
Location: 15023 - 16123 (+)
Gene ID: k141_49786_12
Type: CAZyme
Location: 16145 - 17272 (+)
Gene ID: k141_49786_13
Type: CAZyme
Location: 17277 - 18317 (+)
Gene ID: k141_49786_14
Type: TC
Location: 18369 - 19823 (+)
Gene ID: k141_49786_15
Type: peptidase
Location: 19905 - 21437 (-)
Gene ID: k141_49786_16
Type: CAZyme
Location: 21599 - 22621 (+)
Gene ID: k141_49786_17
Type: CAZyme
Location: 22636 - 23532 (+)
Gene ID: k141_49786_18
Type: pfam
Location: 23555 - 24670 (+)
Gene ID: k141_49786_19
Type: pfam
Location: 24693 - 25706 (+)
Gene ID: k141_49786_20
Type: CAZyme
Location: 25732 - 26418 (+)
Gene ID: k141_49786_21
Type:
Location: 26482 - 27747 (+)
Gene ID: k141_49786_22
Type: CAZyme
Location: 27728 - 28696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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