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Cluster: SW014_11_sub_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_61246 k141_61246_69 80686 82419 - 8.A.59.2.1
TF k141_61246 k141_61246_70 82413 83153 - HTH_AraC | HTH_AraC
TC k141_61246 k141_61246_71 83386 84747 + 3.A.1.1.11
TC k141_61246 k141_61246_72 84768 85685 + 3.A.1.1.11
TC k141_61246 k141_61246_73 85685 86524 + 3.A.1.1.11
CAZyme k141_61246 k141_61246_74 86528 87925 + GH4
Gene ID: k141_61246_69
Type: TC
Location: 80686 - 82419 (-)
Gene ID: k141_61246_70
Type: TF
Location: 82413 - 83153 (-)
Gene ID: k141_61246_71
Type: TC
Location: 83386 - 84747 (+)
Gene ID: k141_61246_72
Type: TC
Location: 84768 - 85685 (+)
Gene ID: k141_61246_73
Type: TC
Location: 85685 - 86524 (+)
Gene ID: k141_61246_74
Type: CAZyme
Location: 86528 - 87925 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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