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Cluster: SW014_11_sub_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_47867 k141_47867_229 241832 243025 + 3.A.1.4.10
TC k141_47867 k141_47867_230 243093 243968 + 3.A.1.4.1
TC k141_47867 k141_47867_231 243982 244881 + 3.A.1.4.10
TC k141_47867 k141_47867_232 244887 245666 + 3.A.1.4.10
TC k141_47867 k141_47867_233 245668 246366 + 3.A.1.4.10
sulfatase k141_47867 k141_47867_234 246387 247148 + S1_6
pfam k141_47867 k141_47867_235 247145 247996 + Polysacc_deac_1
CAZyme k141_47867 k141_47867_236 247989 248813 + CE4
NULL(UNKNOWN) k141_47867 k141_47867_237 248829 250139 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_47867 k141_47867_238 250614 256088 + GH3
Gene ID: k141_47867_229
Type: TC
Location: 241832 - 243025 (+)
Gene ID: k141_47867_230
Type: TC
Location: 243093 - 243968 (+)
Gene ID: k141_47867_231
Type: TC
Location: 243982 - 244881 (+)
Gene ID: k141_47867_232
Type: TC
Location: 244887 - 245666 (+)
Gene ID: k141_47867_233
Type: TC
Location: 245668 - 246366 (+)
Gene ID: k141_47867_234
Type: sulfatase
Location: 246387 - 247148 (+)
Gene ID: k141_47867_235
Type: pfam
Location: 247145 - 247996 (+)
Gene ID: k141_47867_236
Type: CAZyme
Location: 247989 - 248813 (+)
Gene ID: k141_47867_237
Type:
Location: 248829 - 250139 (+)
Gene ID: k141_47867_238
Type: CAZyme
Location: 250614 - 256088 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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