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Cluster: SW011_bin.38_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_80219 k141_80219_11 15655 17031 - GH13_20
TC k141_80219 k141_80219_12 17185 18381 - 2.A.1.2.18
pfam k141_80219 k141_80219_13 18485 18967 - tRNA_edit
TC k141_80219 k141_80219_14 19062 21029 - 9.A.8.1.6
TC k141_80219 k141_80219_15 21014 21418 - 9.A.8.1.6
pfam k141_80219 k141_80219_16 21782 23008 + Zn_Ribbon_1
peptidase k141_80219 k141_80219_17 23245 24144 - S09.UPW
TC k141_80219 k141_80219_18 24391 24954 + 4.A.1.2.6
TC k141_80219 k141_80219_19 25190 27124 + 9.B.97.5.1
pfam k141_80219 k141_80219_20 27260 28663 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) k141_80219 k141_80219_21 28913 29701 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_80219 k141_80219_22 29860 30840 + 3.A.1.34.1
TC k141_80219 k141_80219_23 31045 31968 + 3.A.1.34.1
TC k141_80219 k141_80219_24 31961 32755 + 3.A.1.34.1
pfam k141_80219 k141_80219_25 32828 34858 + Metallophos | 5_nucleotid_C
TC k141_80219 k141_80219_26 34988 35755 + 1.A.23.4.10
Gene ID: k141_80219_11
Type: CAZyme
Location: 15655 - 17031 (-)
Gene ID: k141_80219_12
Type: TC
Location: 17185 - 18381 (-)
Gene ID: k141_80219_13
Type: pfam
Location: 18485 - 18967 (-)
Gene ID: k141_80219_14
Type: TC
Location: 19062 - 21029 (-)
Gene ID: k141_80219_15
Type: TC
Location: 21014 - 21418 (-)
Gene ID: k141_80219_16
Type: pfam
Location: 21782 - 23008 (+)
Gene ID: k141_80219_17
Type: peptidase
Location: 23245 - 24144 (-)
Gene ID: k141_80219_18
Type: TC
Location: 24391 - 24954 (+)
Gene ID: k141_80219_19
Type: TC
Location: 25190 - 27124 (+)
Gene ID: k141_80219_20
Type: pfam
Location: 27260 - 28663 (+)
Gene ID: k141_80219_21
Type:
Location: 28913 - 29701 (+)
Gene ID: k141_80219_22
Type: TC
Location: 29860 - 30840 (+)
Gene ID: k141_80219_23
Type: TC
Location: 31045 - 31968 (+)
Gene ID: k141_80219_24
Type: TC
Location: 31961 - 32755 (+)
Gene ID: k141_80219_25
Type: pfam
Location: 32828 - 34858 (+)
Gene ID: k141_80219_26
Type: TC
Location: 34988 - 35755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_80219_16 vegetarian > vegan 6.52752 0.03217
k141_80219_19 vegan > omnivore 1.22176 0.01287
k141_80219_19 vegetarian > omnivore 1.42753 0.03481
k141_80219_25 vegan > omnivore 1.74187 0.01287
k141_80219_25 vegetarian > omnivore 1.37044 0.02258

🧭 Explore Read Mapping of CGC

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