Cluster: SW004_maxbin.007_sub_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW004_maxbin.007_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_183832 | k141_183832_17 | 17832 | 18758 | - | CE7 |
| TC | k141_183832 | k141_183832_18 | 18890 | 19717 | - | 3.A.1.5.27 |
| TC | k141_183832 | k141_183832_19 | 19718 | 21733 | - | 3.A.1.5.25 |
| TC | k141_183832 | k141_183832_20 | 21737 | 22693 | - | 3.A.1.5.38 |
| TC | k141_183832 | k141_183832_21 | 22851 | 24464 | - | 3.A.1.5.27 |
| pfam | k141_183832 | k141_183832_22 | 24829 | 26769 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_183832 | k141_183832_23 | 26776 | 28458 | - | 2.A.66.4.4 |
Gene ID: k141_183832_17
Type: CAZyme
Location: 17832 - 18758 (-)
Type: CAZyme
Location: 17832 - 18758 (-)
Gene ID: k141_183832_18
Type: TC
Location: 18890 - 19717 (-)
Type: TC
Location: 18890 - 19717 (-)
Gene ID: k141_183832_19
Type: TC
Location: 19718 - 21733 (-)
Type: TC
Location: 19718 - 21733 (-)
Gene ID: k141_183832_20
Type: TC
Location: 21737 - 22693 (-)
Type: TC
Location: 21737 - 22693 (-)
Gene ID: k141_183832_21
Type: TC
Location: 22851 - 24464 (-)
Type: TC
Location: 22851 - 24464 (-)
Gene ID: k141_183832_22
Type: pfam
Location: 24829 - 26769 (-)
Type: pfam
Location: 24829 - 26769 (-)
Gene ID: k141_183832_23
Type: TC
Location: 26776 - 28458 (-)
Type: TC
Location: 26776 - 28458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958445065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.