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Cluster: SW004_maxbin.007_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_123449 k141_123449_161 190426 191595 - CE9
STP k141_123449 k141_123449_162 191714 192880 - SIS | SIS
TF k141_123449 k141_123449_163 192995 193726 - GntR
TC k141_123449 k141_123449_164 193912 194994 - 4.A.6.1.4
TC k141_123449 k141_123449_165 194984 195784 - 4.A.6.1.4
TC k141_123449 k141_123449_166 195875 196357 - 4.A.6.1.4
pfam k141_123449 k141_123449_167 196394 196675 - YajC
TC k141_123449 k141_123449_168 196675 197118 - 4.A.6.1.16
Gene ID: k141_123449_161
Type: CAZyme
Location: 190426 - 191595 (-)
Gene ID: k141_123449_162
Type: STP
Location: 191714 - 192880 (-)
Gene ID: k141_123449_163
Type: TF
Location: 192995 - 193726 (-)
Gene ID: k141_123449_164
Type: TC
Location: 193912 - 194994 (-)
Gene ID: k141_123449_165
Type: TC
Location: 194984 - 195784 (-)
Gene ID: k141_123449_166
Type: TC
Location: 195875 - 196357 (-)
Gene ID: k141_123449_167
Type: pfam
Location: 196394 - 196675 (-)
Gene ID: k141_123449_168
Type: TC
Location: 196675 - 197118 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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