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Cluster: SW003_34_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44212 k141_44212_96 99091 99780 - 9.B.120.1.2
pfam k141_44212 k141_44212_97 99899 101221 - UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_44212 k141_44212_98 101223 102284 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme k141_44212 k141_44212_99 102284 103891 - GT83
TC k141_44212 k141_44212_100 103893 104153 - 2.A.123.4.1
CAZyme k141_44212 k141_44212_101 104146 104868 - GT2
TF k141_44212 k141_44212_102 105344 106015 + Trans_reg_C
STP k141_44212 k141_44212_103 106028 107380 + HATPase_c | HisKA
CAZyme k141_44212 k141_44212_104 107640 109142 + GT83
TC k141_44212 k141_44212_105 109391 110317 + 1.B.21.1.2
pfam k141_44212 k141_44212_106 110627 111493 - YitT_membrane | DUF2179
pfam k141_44212 k141_44212_107 111516 112562 - AP_endonuc_2
TC k141_44212 k141_44212_108 112601 113872 - 2.A.1.52.1
TF k141_44212 k141_44212_109 114107 114871 - HTH_DeoR
TC k141_44212 k141_44212_110 114876 116225 - 2.A.25.1.3
Gene ID: k141_44212_96
Type: TC
Location: 99091 - 99780 (-)
Gene ID: k141_44212_97
Type: pfam
Location: 99899 - 101221 (-)
Gene ID: k141_44212_98
Type: pfam
Location: 101223 - 102284 (-)
Gene ID: k141_44212_99
Type: CAZyme
Location: 102284 - 103891 (-)
Gene ID: k141_44212_100
Type: TC
Location: 103893 - 104153 (-)
Gene ID: k141_44212_101
Type: CAZyme
Location: 104146 - 104868 (-)
Gene ID: k141_44212_102
Type: TF
Location: 105344 - 106015 (+)
Gene ID: k141_44212_103
Type: STP
Location: 106028 - 107380 (+)
Gene ID: k141_44212_104
Type: CAZyme
Location: 107640 - 109142 (+)
Gene ID: k141_44212_105
Type: TC
Location: 109391 - 110317 (+)
Gene ID: k141_44212_106
Type: pfam
Location: 110627 - 111493 (-)
Gene ID: k141_44212_107
Type: pfam
Location: 111516 - 112562 (-)
Gene ID: k141_44212_108
Type: TC
Location: 112601 - 113872 (-)
Gene ID: k141_44212_109
Type: TF
Location: 114107 - 114871 (-)
Gene ID: k141_44212_110
Type: TC
Location: 114876 - 116225 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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