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Cluster: SW003_34_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_85084 k141_85084_13 11906 13156 - 2.A.23.1.2
pfam k141_85084 k141_85084_14 13390 14223 + WYL
CAZyme k141_85084 k141_85084_15 14369 15448 + CE4
CAZyme k141_85084 k141_85084_16 15470 16252 + GT2
CAZyme k141_85084 k141_85084_17 16224 17237 + GT9
CAZyme k141_85084 k141_85084_18 17257 18276 + GT9
pfam k141_85084 k141_85084_19 18269 18961 + WaaY
CAZyme k141_85084 k141_85084_20 18972 19976 + GT9
Gene ID: k141_85084_13
Type: TC
Location: 11906 - 13156 (-)
Gene ID: k141_85084_14
Type: pfam
Location: 13390 - 14223 (+)
Gene ID: k141_85084_15
Type: CAZyme
Location: 14369 - 15448 (+)
Gene ID: k141_85084_16
Type: CAZyme
Location: 15470 - 16252 (+)
Gene ID: k141_85084_17
Type: CAZyme
Location: 16224 - 17237 (+)
Gene ID: k141_85084_18
Type: CAZyme
Location: 17257 - 18276 (+)
Gene ID: k141_85084_19
Type: pfam
Location: 18269 - 18961 (+)
Gene ID: k141_85084_20
Type: CAZyme
Location: 18972 - 19976 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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