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Cluster: SW003_34_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31508 k141_31508_19 24455 25873 + 2.A.25.1.3
CAZyme k141_31508 k141_31508_20 25938 27365 - GH1
TC k141_31508 k141_31508_21 27365 29323 - 4.A.1.2.6
pfam k141_31508 k141_31508_22 29389 30240 - PRD | PRD | CAT_RBD
TC k141_31508 k141_31508_23 30726 31598 + 3.A.1.1.11
TC k141_31508 k141_31508_24 31598 32410 + 3.A.1.1.34
TC k141_31508 k141_31508_25 32471 33772 + 3.A.1.1.3
TC k141_31508 k141_31508_26 33795 34943 + 3.A.1.1.6
pfam k141_31508 k141_31508_27 35082 35642 + G3P_antiterm
pfam k141_31508 k141_31508_28 35664 36398 + GDPD
TC k141_31508 k141_31508_29 36640 37377 + 1.A.8.2.1
Gene ID: k141_31508_19
Type: TC
Location: 24455 - 25873 (+)
Gene ID: k141_31508_20
Type: CAZyme
Location: 25938 - 27365 (-)
Gene ID: k141_31508_21
Type: TC
Location: 27365 - 29323 (-)
Gene ID: k141_31508_22
Type: pfam
Location: 29389 - 30240 (-)
Gene ID: k141_31508_23
Type: TC
Location: 30726 - 31598 (+)
Gene ID: k141_31508_24
Type: TC
Location: 31598 - 32410 (+)
Gene ID: k141_31508_25
Type: TC
Location: 32471 - 33772 (+)
Gene ID: k141_31508_26
Type: TC
Location: 33795 - 34943 (+)
Gene ID: k141_31508_27
Type: pfam
Location: 35082 - 35642 (+)
Gene ID: k141_31508_28
Type: pfam
Location: 35664 - 36398 (+)
Gene ID: k141_31508_29
Type: TC
Location: 36640 - 37377 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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