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Cluster: SW003_34_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_94034 k141_94034_246 255052 256485 - 2.A.2.3.2
CAZyme k141_94034 k141_94034_247 256525 257715 - GH88
sulfatase k141_94034 k141_94034_248 257736 259145 - S1_27
CAZyme k141_94034 k141_94034_249 259373 261793 - PL8
pfam k141_94034 k141_94034_250 261817 265626 - Autotransporter
TC k141_94034 k141_94034_251 266181 267746 - 3.A.1.1.10
pfam k141_94034 k141_94034_252 267934 268770 - KduI
sulfatase k141_94034 k141_94034_253 268830 269612 - S1_4
CAZyme k141_94034 k141_94034_254 269816 271780 - PL8
CAZyme k141_94034 k141_94034_255 271999 273990 - PL8
Gene ID: k141_94034_246
Type: TC
Location: 255052 - 256485 (-)
Gene ID: k141_94034_247
Type: CAZyme
Location: 256525 - 257715 (-)
Gene ID: k141_94034_248
Type: sulfatase
Location: 257736 - 259145 (-)
Gene ID: k141_94034_249
Type: CAZyme
Location: 259373 - 261793 (-)
Gene ID: k141_94034_250
Type: pfam
Location: 261817 - 265626 (-)
Gene ID: k141_94034_251
Type: TC
Location: 266181 - 267746 (-)
Gene ID: k141_94034_252
Type: pfam
Location: 267934 - 268770 (-)
Gene ID: k141_94034_253
Type: sulfatase
Location: 268830 - 269612 (-)
Gene ID: k141_94034_254
Type: CAZyme
Location: 269816 - 271780 (-)
Gene ID: k141_94034_255
Type: CAZyme
Location: 271999 - 273990 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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