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Cluster: SPMP96_bin.76_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_14 opera_contig_14_120 119169 121811 + 3.A.3.2.21
CAZyme opera_contig_14 opera_contig_14_121 121808 122731 + CE4
TC opera_contig_14 opera_contig_14_122 122899 123657 + 3.A.1.17.8
TC opera_contig_14 opera_contig_14_123 123650 124465 + 3.A.1.17.3
pfam opera_contig_14 opera_contig_14_124 124462 125448 + NMT1 | NMT1_2 | NMT1_2
TC opera_contig_14 opera_contig_14_125 125519 126367 - 3.A.1.24.5
TC opera_contig_14 opera_contig_14_126 126516 127193 - 3.A.1.24.5
TC opera_contig_14 opera_contig_14_127 127197 128189 - 3.A.1.24.2
Gene ID: opera_contig_14_120
Type: TC
Location: 119169 - 121811 (+)
Gene ID: opera_contig_14_121
Type: CAZyme
Location: 121808 - 122731 (+)
Gene ID: opera_contig_14_122
Type: TC
Location: 122899 - 123657 (+)
Gene ID: opera_contig_14_123
Type: TC
Location: 123650 - 124465 (+)
Gene ID: opera_contig_14_124
Type: pfam
Location: 124462 - 125448 (+)
Gene ID: opera_contig_14_125
Type: TC
Location: 125519 - 126367 (-)
Gene ID: opera_contig_14_126
Type: TC
Location: 126516 - 127193 (-)
Gene ID: opera_contig_14_127
Type: TC
Location: 127197 - 128189 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_14_121 vegetarian > omnivore 1.16684 0.00022
opera_contig_14_123 vegetarian > omnivore 1.16121 0.00022

🧭 Explore Read Mapping of CGC

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