Cluster: SPMP90_bin.37_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP90_bin.37
- CGC Family ID: CGCFAM_01090
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_14 | opera_contig_14_6 | 4951 | 7053 | + | 3.A.3.32.3 |
| pfam | opera_contig_14 | opera_contig_14_7 | 7116 | 8594 | - | Mur_ligase_C | Mur_ligase_M |
| pfam | opera_contig_14 | opera_contig_14_8 | 8622 | 10055 | - | POTRA_1 |
| CAZyme | opera_contig_14 | opera_contig_14_9 | 10090 | 11217 | - | GT28 |
| TC | opera_contig_14 | opera_contig_14_10 | 11246 | 12565 | - | 2.A.103.1.3 |
| TC | opera_contig_14 | opera_contig_14_11 | 12599 | 13576 | - | 9.B.146.1.3 |
Gene ID: opera_contig_14_6
Type: TC
Location: 4951 - 7053 (+)
Type: TC
Location: 4951 - 7053 (+)
Gene ID: opera_contig_14_7
Type: pfam
Location: 7116 - 8594 (-)
Type: pfam
Location: 7116 - 8594 (-)
Gene ID: opera_contig_14_8
Type: pfam
Location: 8622 - 10055 (-)
Type: pfam
Location: 8622 - 10055 (-)
Gene ID: opera_contig_14_9
Type: CAZyme
Location: 10090 - 11217 (-)
Type: CAZyme
Location: 10090 - 11217 (-)
Gene ID: opera_contig_14_10
Type: TC
Location: 11246 - 12565 (-)
Type: TC
Location: 11246 - 12565 (-)
Gene ID: opera_contig_14_11
Type: TC
Location: 12599 - 13576 (-)
Type: TC
Location: 12599 - 13576 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.