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Cluster: SPMP90_bin.37_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_68 opera_contig_68_5 2309 3520 - 9.B.10.1.1
peptidase opera_contig_68 opera_contig_68_6 3774 5573 + M24.UPB
TF opera_contig_68 opera_contig_68_7 5578 6300 + LytTR
CAZyme opera_contig_68 opera_contig_68_8 6360 7343 - GT2
pfam opera_contig_68 opera_contig_68_9 7548 8198 - Hydrolase | HAD | HAD_2
pfam opera_contig_68 opera_contig_68_10 8349 9533 + Patatin
TC opera_contig_68 opera_contig_68_11 9520 11121 + 8.A.7.1.5
pfam opera_contig_68 opera_contig_68_12 11171 11914 - Methyltrans_RNA | PUA_4
pfam opera_contig_68 opera_contig_68_13 11938 12852 - TRM5-TYW2_MTfase | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC opera_contig_68 opera_contig_68_14 13171 14637 + 4.A.1.1.7
Gene ID: opera_contig_68_5
Type: TC
Location: 2309 - 3520 (-)
Gene ID: opera_contig_68_6
Type: peptidase
Location: 3774 - 5573 (+)
Gene ID: opera_contig_68_7
Type: TF
Location: 5578 - 6300 (+)
Gene ID: opera_contig_68_8
Type: CAZyme
Location: 6360 - 7343 (-)
Gene ID: opera_contig_68_9
Type: pfam
Location: 7548 - 8198 (-)
Gene ID: opera_contig_68_10
Type: pfam
Location: 8349 - 9533 (+)
Gene ID: opera_contig_68_11
Type: TC
Location: 9520 - 11121 (+)
Gene ID: opera_contig_68_12
Type: pfam
Location: 11171 - 11914 (-)
Gene ID: opera_contig_68_13
Type: pfam
Location: 11938 - 12852 (-)
Gene ID: opera_contig_68_14
Type: TC
Location: 13171 - 14637 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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