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Cluster: SPMP90_bin.37_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_58 opera_contig_58_35 29011 30297 - 2.A.37.3.3
CAZyme opera_contig_58 opera_contig_58_36 30573 31601 - GT2
TC opera_contig_58 opera_contig_58_37 31850 33433 + 2.A.16.2.2
pfam opera_contig_58 opera_contig_58_38 33590 34147 - Fer4_12
pfam opera_contig_58 opera_contig_58_39 34326 36497 - Gly_radical | ATP-cone | NRDD
CAZyme opera_contig_58 opera_contig_58_40 42697 43854 + GT4
pfam opera_contig_58 opera_contig_58_41 43927 45054 - Glyphos_transf
NULL(UNKNOWN) opera_contig_58 opera_contig_58_42 45099 46502 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_58 opera_contig_58_43 46544 47653 - GT4
Gene ID: opera_contig_58_35
Type: TC
Location: 29011 - 30297 (-)
Gene ID: opera_contig_58_36
Type: CAZyme
Location: 30573 - 31601 (-)
Gene ID: opera_contig_58_37
Type: TC
Location: 31850 - 33433 (+)
Gene ID: opera_contig_58_38
Type: pfam
Location: 33590 - 34147 (-)
Gene ID: opera_contig_58_39
Type: pfam
Location: 34326 - 36497 (-)
Gene ID: opera_contig_58_40
Type: CAZyme
Location: 42697 - 43854 (+)
Gene ID: opera_contig_58_41
Type: pfam
Location: 43927 - 45054 (-)
Gene ID: opera_contig_58_42
Type:
Location: 45099 - 46502 (-)
Gene ID: opera_contig_58_43
Type: CAZyme
Location: 46544 - 47653 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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