Cluster: SPMP90_bin.37_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP90_bin.37
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_40 | opera_contig_40_60 | 59991 | 60875 | + | 3.A.1.1.18 |
| TC | opera_contig_40 | opera_contig_40_61 | 60887 | 61783 | + | 3.A.1.1.25 |
| pfam | opera_contig_40 | opera_contig_40_62 | 61795 | 61986 | + | DUF6903 |
| CAZyme | opera_contig_40 | opera_contig_40_63 | 62005 | 64164 | + | GH112 |
| pfam | opera_contig_40 | opera_contig_40_64 | 64398 | 65297 | - | DUF4300 |
| pfam | opera_contig_40 | opera_contig_40_65 | 66021 | 67046 | - | ADH_zinc_N | ADH_N |
| TC | opera_contig_40 | opera_contig_40_66 | 67360 | 68649 | - | 2.A.56.1.6 |
| pfam | opera_contig_40 | opera_contig_40_67 | 68654 | 69169 | - | DctQ |
| TC | opera_contig_40 | opera_contig_40_68 | 69287 | 70357 | - | 2.A.56.1.3 |
| TC | opera_contig_40 | opera_contig_40_69 | 70807 | 72096 | - | 2.A.56.1.6 |
| pfam | opera_contig_40 | opera_contig_40_70 | 72113 | 72619 | - | DctQ |
| TC | opera_contig_40 | opera_contig_40_71 | 72651 | 73721 | - | 2.A.56.1.3 |
Gene ID: opera_contig_40_60
Type: TC
Location: 59991 - 60875 (+)
Type: TC
Location: 59991 - 60875 (+)
Gene ID: opera_contig_40_61
Type: TC
Location: 60887 - 61783 (+)
Type: TC
Location: 60887 - 61783 (+)
Gene ID: opera_contig_40_62
Type: pfam
Location: 61795 - 61986 (+)
Type: pfam
Location: 61795 - 61986 (+)
Gene ID: opera_contig_40_63
Type: CAZyme
Location: 62005 - 64164 (+)
Type: CAZyme
Location: 62005 - 64164 (+)
Gene ID: opera_contig_40_64
Type: pfam
Location: 64398 - 65297 (-)
Type: pfam
Location: 64398 - 65297 (-)
Gene ID: opera_contig_40_65
Type: pfam
Location: 66021 - 67046 (-)
Type: pfam
Location: 66021 - 67046 (-)
Gene ID: opera_contig_40_66
Type: TC
Location: 67360 - 68649 (-)
Type: TC
Location: 67360 - 68649 (-)
Gene ID: opera_contig_40_67
Type: pfam
Location: 68654 - 69169 (-)
Type: pfam
Location: 68654 - 69169 (-)
Gene ID: opera_contig_40_68
Type: TC
Location: 69287 - 70357 (-)
Type: TC
Location: 69287 - 70357 (-)
Gene ID: opera_contig_40_69
Type: TC
Location: 70807 - 72096 (-)
Type: TC
Location: 70807 - 72096 (-)
Gene ID: opera_contig_40_70
Type: pfam
Location: 72113 - 72619 (-)
Type: pfam
Location: 72113 - 72619 (-)
Gene ID: opera_contig_40_71
Type: TC
Location: 72651 - 73721 (-)
Type: TC
Location: 72651 - 73721 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_40_65 | vegetarian > omnivore | 1.50433 | 0.02695 |
| opera_contig_40_66 | vegetarian > omnivore | 1.57189 | 0.02695 |
| opera_contig_40_67 | vegetarian > omnivore | 1.40112 | 0.02695 |
| opera_contig_40_68 | vegetarian > omnivore | 1.39554 | 0.02695 |
| opera_contig_40_69 | vegetarian > omnivore | 1.20656 | 0.02695 |
| opera_contig_40_70 | vegetarian > omnivore | 1.36562 | 0.02695 |
| opera_contig_40_71 | vegetarian > omnivore | 1.14026 | 0.02695 |