Cluster: SPMP90_bin.37_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP90_bin.37
- CGC Family ID: CGCFAM_04450
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_24 | opera_contig_24_48 | 53690 | 55087 | - | GH32 |
| TC | opera_contig_24 | opera_contig_24_49 | 55084 | 56472 | - | 4.A.1.2.1 |
| TF | opera_contig_24 | opera_contig_24_50 | 56856 | 57842 | - | LacI |
| TC | opera_contig_24 | opera_contig_24_51 | 57999 | 59342 | + | 2.A.66.1.37 |
| TF | opera_contig_24 | opera_contig_24_52 | 59456 | 60307 | - | HTH_AraC |
| TC | opera_contig_24 | opera_contig_24_53 | 60432 | 61547 | + | 3.A.1.1.26 |
Gene ID: opera_contig_24_48
Type: CAZyme
Location: 53690 - 55087 (-)
Type: CAZyme
Location: 53690 - 55087 (-)
Gene ID: opera_contig_24_49
Type: TC
Location: 55084 - 56472 (-)
Type: TC
Location: 55084 - 56472 (-)
Gene ID: opera_contig_24_50
Type: TF
Location: 56856 - 57842 (-)
Type: TF
Location: 56856 - 57842 (-)
Gene ID: opera_contig_24_51
Type: TC
Location: 57999 - 59342 (+)
Type: TC
Location: 57999 - 59342 (+)
Gene ID: opera_contig_24_52
Type: TF
Location: 59456 - 60307 (-)
Type: TF
Location: 59456 - 60307 (-)
Gene ID: opera_contig_24_53
Type: TC
Location: 60432 - 61547 (+)
Type: TC
Location: 60432 - 61547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_24_50 | vegetarian > omnivore | 1.05217 | 0.02695 |