Cluster: SPMP90_bin.37_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP90_bin.37
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_24 | opera_contig_24_32 | 32105 | 33250 | - | GH105 |
| CAZyme | opera_contig_24 | opera_contig_24_33 | 33255 | 34811 | - | GH28 |
| TF | opera_contig_24 | opera_contig_24_34 | 34900 | 35721 | + | HTH_AraC | HTH_AraC |
| TC | opera_contig_24 | opera_contig_24_35 | 35804 | 36661 | - | 3.A.1.1.11 |
| TC | opera_contig_24 | opera_contig_24_36 | 36672 | 37601 | - | 3.A.1.1.11 |
| TC | opera_contig_24 | opera_contig_24_37 | 37791 | 39179 | - | 3.A.1.1.11 |
Gene ID: opera_contig_24_32
Type: CAZyme
Location: 32105 - 33250 (-)
Type: CAZyme
Location: 32105 - 33250 (-)
Gene ID: opera_contig_24_33
Type: CAZyme
Location: 33255 - 34811 (-)
Type: CAZyme
Location: 33255 - 34811 (-)
Gene ID: opera_contig_24_34
Type: TF
Location: 34900 - 35721 (+)
Type: TF
Location: 34900 - 35721 (+)
Gene ID: opera_contig_24_35
Type: TC
Location: 35804 - 36661 (-)
Type: TC
Location: 35804 - 36661 (-)
Gene ID: opera_contig_24_36
Type: TC
Location: 36672 - 37601 (-)
Type: TC
Location: 36672 - 37601 (-)
Gene ID: opera_contig_24_37
Type: TC
Location: 37791 - 39179 (-)
Type: TC
Location: 37791 - 39179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.