Cluster: SPMP90_bin.37_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: SPMP90_bin.37
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_24 | opera_contig_24_10 | 10683 | 11567 | + | 2.A.115.1.1 |
| pfam | opera_contig_24 | opera_contig_24_11 | 12090 | 13067 | + | PRD | PRD | CAT_RBD |
| TC | opera_contig_24 | opera_contig_24_12 | 13064 | 14917 | + | 4.A.1.2.11 |
| CAZyme | opera_contig_24 | opera_contig_24_13 | 14927 | 16408 | + | GH1 |
| TC | opera_contig_24 | opera_contig_24_14 | 16648 | 16875 | + | 3.D.1.6.4 |
Gene ID: opera_contig_24_10
Type: TC
Location: 10683 - 11567 (+)
Type: TC
Location: 10683 - 11567 (+)
Gene ID: opera_contig_24_11
Type: pfam
Location: 12090 - 13067 (+)
Type: pfam
Location: 12090 - 13067 (+)
Gene ID: opera_contig_24_12
Type: TC
Location: 13064 - 14917 (+)
Type: TC
Location: 13064 - 14917 (+)
Gene ID: opera_contig_24_13
Type: CAZyme
Location: 14927 - 16408 (+)
Type: CAZyme
Location: 14927 - 16408 (+)
Gene ID: opera_contig_24_14
Type: TC
Location: 16648 - 16875 (+)
Type: TC
Location: 16648 - 16875 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_24_11 | vegetarian > vegan | 6.48804 | 0.00038 |
| opera_contig_24_12 | vegetarian > vegan | 5.94392 | 0.00038 |
| opera_contig_24_13 | vegetarian > vegan | 2.61525 | 0.00927 |