Cluster: SPMP90_bin.37_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP90_bin.37
- CGC Family ID: CGCFAM_03192
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_18 | opera_contig_18_25 | 23346 | 25046 | + | 4.A.1.2.6 |
| CAZyme | opera_contig_18 | opera_contig_18_26 | 25169 | 26608 | + | GH1 |
| peptidase | opera_contig_18 | opera_contig_18_27 | 26760 | 28484 | + | S09.UPW |
| CAZyme | opera_contig_18 | opera_contig_18_28 | 28554 | 30512 | - | GH13_14 |
| TC | opera_contig_18 | opera_contig_18_29 | 30646 | 32685 | + | 3.A.24.1.1 |
Gene ID: opera_contig_18_25
Type: TC
Location: 23346 - 25046 (+)
Type: TC
Location: 23346 - 25046 (+)
Gene ID: opera_contig_18_26
Type: CAZyme
Location: 25169 - 26608 (+)
Type: CAZyme
Location: 25169 - 26608 (+)
Gene ID: opera_contig_18_27
Type: peptidase
Location: 26760 - 28484 (+)
Type: peptidase
Location: 26760 - 28484 (+)
Gene ID: opera_contig_18_28
Type: CAZyme
Location: 28554 - 30512 (-)
Type: CAZyme
Location: 28554 - 30512 (-)
Gene ID: opera_contig_18_29
Type: TC
Location: 30646 - 32685 (+)
Type: TC
Location: 30646 - 32685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_18_25 | vegetarian > omnivore | 1.37242 | 0.02695 |
| opera_contig_18_27 | vegetarian > omnivore | 1.47165 | 0.02695 |