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Cluster: SPMP88_bin.46_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_88 opera_contig_88_43 41011 43104 - 3.A.1.3.15
TC opera_contig_88 opera_contig_88_44 43106 44905 - 3.A.1.105.6
TF opera_contig_88 opera_contig_88_45 45110 45454 - HTH_3
peptidase opera_contig_88 opera_contig_88_46 45838 46482 - C15.001
TC opera_contig_88 opera_contig_88_47 46495 47433 - 9.B.211.1.2
pfam opera_contig_88 opera_contig_88_48 47436 48137 - DUF969
peptidase opera_contig_88 opera_contig_88_49 48284 49276 - M29.UNW
CAZyme opera_contig_88 opera_contig_88_50 49577 51058 - GH1
CAZyme opera_contig_88 opera_contig_88_51 51193 52284 - GH170
TC opera_contig_88 opera_contig_88_52 52473 54182 + 9.B.146.1.1
Gene ID: opera_contig_88_43
Type: TC
Location: 41011 - 43104 (-)
Gene ID: opera_contig_88_44
Type: TC
Location: 43106 - 44905 (-)
Gene ID: opera_contig_88_45
Type: TF
Location: 45110 - 45454 (-)
Gene ID: opera_contig_88_46
Type: peptidase
Location: 45838 - 46482 (-)
Gene ID: opera_contig_88_47
Type: TC
Location: 46495 - 47433 (-)
Gene ID: opera_contig_88_48
Type: pfam
Location: 47436 - 48137 (-)
Gene ID: opera_contig_88_49
Type: peptidase
Location: 48284 - 49276 (-)
Gene ID: opera_contig_88_50
Type: CAZyme
Location: 49577 - 51058 (-)
Gene ID: opera_contig_88_51
Type: CAZyme
Location: 51193 - 52284 (-)
Gene ID: opera_contig_88_52
Type: TC
Location: 52473 - 54182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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