Cluster: SPMP88_bin.46_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP88_bin.46
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_348610 | opera_contig_348610_52 | 44618 | 45517 | + | 2.A.7.3.31 |
| NULL(UNKNOWN) | opera_contig_348610 | opera_contig_348610_53 | 45564 | 45947 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_348610 | opera_contig_348610_54 | 45958 | 46563 | - | ABC2_membrane_5 |
| TC | opera_contig_348610 | opera_contig_348610_55 | 46560 | 47378 | - | 3.A.1.149.1 |
| TF | opera_contig_348610 | opera_contig_348610_56 | 47365 | 47751 | - | GntR |
| CAZyme | opera_contig_348610 | opera_contig_348610_57 | 47882 | 49321 | + | GH1 |
Gene ID: opera_contig_348610_52
Type: TC
Location: 44618 - 45517 (+)
Type: TC
Location: 44618 - 45517 (+)
Gene ID: opera_contig_348610_53
Type:
Location: 45564 - 45947 (+)
Type:
Location: 45564 - 45947 (+)
Gene ID: opera_contig_348610_54
Type: pfam
Location: 45958 - 46563 (-)
Type: pfam
Location: 45958 - 46563 (-)
Gene ID: opera_contig_348610_55
Type: TC
Location: 46560 - 47378 (-)
Type: TC
Location: 46560 - 47378 (-)
Gene ID: opera_contig_348610_56
Type: TF
Location: 47365 - 47751 (-)
Type: TF
Location: 47365 - 47751 (-)
Gene ID: opera_contig_348610_57
Type: CAZyme
Location: 47882 - 49321 (+)
Type: CAZyme
Location: 47882 - 49321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_348610_57 | vegan > omnivore | 1.50681 | 0.04889 |