Cluster: SPMP88_bin.46_CGC16
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP88_bin.46
- CGC Family ID: CGCFAM_02114
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_348609 | opera_contig_348609_262 | 266925 | 268283 | - | 2.A.22.5.3 |
| TC | opera_contig_348609 | opera_contig_348609_263 | 268361 | 268870 | - | 2.A.87.3.3 |
| pfam | opera_contig_348609 | opera_contig_348609_264 | 268854 | 269207 | - | NusG_II |
| pfam | opera_contig_348609 | opera_contig_348609_265 | 269245 | 270213 | + | ApbE |
| TC | opera_contig_348609 | opera_contig_348609_266 | 270237 | 271022 | - | 3.D.6.1.3 |
| TC | opera_contig_348609 | opera_contig_348609_267 | 271038 | 271613 | - | 3.D.6.1.2 |
| TC | opera_contig_348609 | opera_contig_348609_268 | 271610 | 272305 | - | 3.D.6.1.2 |
| TC | opera_contig_348609 | opera_contig_348609_269 | 272298 | 272918 | - | 3.D.6.1.2 |
| TC | opera_contig_348609 | opera_contig_348609_270 | 272915 | 273844 | - | 3.D.6.1.2 |
| TC | opera_contig_348609 | opera_contig_348609_271 | 273854 | 275164 | - | 3.D.6.1.2 |
| CAZyme | opera_contig_348609 | opera_contig_348609_272 | 275302 | 276714 | - | GH1 |
| pfam | opera_contig_348609 | opera_contig_348609_273 | 276847 | 278055 | - | MMR_HSR1 | GTP-bdg_N | GTP-bdg_M |
| TC | opera_contig_348609 | opera_contig_348609_274 | 278437 | 280176 | - | 3.A.1.21.1 |
| TC | opera_contig_348609 | opera_contig_348609_275 | 280178 | 281926 | - | 3.A.1.21.1 |
Gene ID: opera_contig_348609_262
Type: TC
Location: 266925 - 268283 (-)
Type: TC
Location: 266925 - 268283 (-)
Gene ID: opera_contig_348609_263
Type: TC
Location: 268361 - 268870 (-)
Type: TC
Location: 268361 - 268870 (-)
Gene ID: opera_contig_348609_264
Type: pfam
Location: 268854 - 269207 (-)
Type: pfam
Location: 268854 - 269207 (-)
Gene ID: opera_contig_348609_265
Type: pfam
Location: 269245 - 270213 (+)
Type: pfam
Location: 269245 - 270213 (+)
Gene ID: opera_contig_348609_266
Type: TC
Location: 270237 - 271022 (-)
Type: TC
Location: 270237 - 271022 (-)
Gene ID: opera_contig_348609_267
Type: TC
Location: 271038 - 271613 (-)
Type: TC
Location: 271038 - 271613 (-)
Gene ID: opera_contig_348609_268
Type: TC
Location: 271610 - 272305 (-)
Type: TC
Location: 271610 - 272305 (-)
Gene ID: opera_contig_348609_269
Type: TC
Location: 272298 - 272918 (-)
Type: TC
Location: 272298 - 272918 (-)
Gene ID: opera_contig_348609_270
Type: TC
Location: 272915 - 273844 (-)
Type: TC
Location: 272915 - 273844 (-)
Gene ID: opera_contig_348609_271
Type: TC
Location: 273854 - 275164 (-)
Type: TC
Location: 273854 - 275164 (-)
Gene ID: opera_contig_348609_272
Type: CAZyme
Location: 275302 - 276714 (-)
Type: CAZyme
Location: 275302 - 276714 (-)
Gene ID: opera_contig_348609_273
Type: pfam
Location: 276847 - 278055 (-)
Type: pfam
Location: 276847 - 278055 (-)
Gene ID: opera_contig_348609_274
Type: TC
Location: 278437 - 280176 (-)
Type: TC
Location: 278437 - 280176 (-)
Gene ID: opera_contig_348609_275
Type: TC
Location: 280178 - 281926 (-)
Type: TC
Location: 280178 - 281926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_348609_272 | vegan > omnivore | 1.90978 | 0.04889 |