Cluster: SPMP88_bin.46_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP88_bin.46
- CGC Family ID: CGCFAM_02293
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_37 | opera_contig_37_18 | 17904 | 19304 | - | GH1 |
| TC | opera_contig_37 | opera_contig_37_19 | 19377 | 21026 | - | 4.A.3.1.1 |
| TC | opera_contig_37 | opera_contig_37_20 | 21039 | 21344 | - | 4.A.3.1.1 |
| TF | opera_contig_37 | opera_contig_37_21 | 21583 | 22338 | + | HTH_DeoR |
| NULL(UNKNOWN) | opera_contig_37 | opera_contig_37_22 | 22351 | 22632 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_37 | opera_contig_37_23 | 22709 | 23614 | - | 8.A.21.2.2 |
Gene ID: opera_contig_37_18
Type: CAZyme
Location: 17904 - 19304 (-)
Type: CAZyme
Location: 17904 - 19304 (-)
Gene ID: opera_contig_37_19
Type: TC
Location: 19377 - 21026 (-)
Type: TC
Location: 19377 - 21026 (-)
Gene ID: opera_contig_37_20
Type: TC
Location: 21039 - 21344 (-)
Type: TC
Location: 21039 - 21344 (-)
Gene ID: opera_contig_37_21
Type: TF
Location: 21583 - 22338 (+)
Type: TF
Location: 21583 - 22338 (+)
Gene ID: opera_contig_37_22
Type:
Location: 22351 - 22632 (+)
Type:
Location: 22351 - 22632 (+)
Gene ID: opera_contig_37_23
Type: TC
Location: 22709 - 23614 (-)
Type: TC
Location: 22709 - 23614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_37_18 | vegan > omnivore | 1.06010 | 0.04889 |