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Cluster: SPMP87_bin.22_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_95484 opera_contig_95484_708 783693 786194 - GH31_2
CAZyme opera_contig_95484 opera_contig_95484_709 786208 787335 - CE15
TC opera_contig_95484 opera_contig_95484_710 787424 788737 - 3.A.1.1.44
TF opera_contig_95484 opera_contig_95484_711 788829 789737 - HTH_AraC | HTH_AraC
CAZyme opera_contig_95484 opera_contig_95484_712 789734 790834 - GH105
NULL(UNKNOWN) opera_contig_95484 opera_contig_95484_713 790839 793358 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_95484 opera_contig_95484_714 793369 794199 - 3.A.1.1.39
TC opera_contig_95484 opera_contig_95484_715 794189 795064 - 3.A.1.1.20
Gene ID: opera_contig_95484_708
Type: CAZyme
Location: 783693 - 786194 (-)
Gene ID: opera_contig_95484_709
Type: CAZyme
Location: 786208 - 787335 (-)
Gene ID: opera_contig_95484_710
Type: TC
Location: 787424 - 788737 (-)
Gene ID: opera_contig_95484_711
Type: TF
Location: 788829 - 789737 (-)
Gene ID: opera_contig_95484_712
Type: CAZyme
Location: 789734 - 790834 (-)
Gene ID: opera_contig_95484_713
Type:
Location: 790839 - 793358 (-)
Gene ID: opera_contig_95484_714
Type: TC
Location: 793369 - 794199 (-)
Gene ID: opera_contig_95484_715
Type: TC
Location: 794189 - 795064 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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