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Cluster: SPMP87_bin.22_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_95488 opera_contig_95488_106 111838 112650 + 3.A.1.104.1
peptidase opera_contig_95488 opera_contig_95488_107 112657 113256 + M95.UPW
pfam opera_contig_95488 opera_contig_95488_108 113355 113672 - Thioredoxin | Thioredoxin_2 | TraF | Thioredoxin_9
TC opera_contig_95488 opera_contig_95488_109 113777 114361 - 2.A.51.1.6
pfam opera_contig_95488 opera_contig_95488_110 114358 114951 - Chromate_transp
TF opera_contig_95488 opera_contig_95488_111 115121 116002 + HTH_1
TC opera_contig_95488 opera_contig_95488_112 115971 117527 + 3.A.1.103.6
CAZyme opera_contig_95488 opera_contig_95488_113 117520 121455 + GT2
Gene ID: opera_contig_95488_106
Type: TC
Location: 111838 - 112650 (+)
Gene ID: opera_contig_95488_107
Type: peptidase
Location: 112657 - 113256 (+)
Gene ID: opera_contig_95488_108
Type: pfam
Location: 113355 - 113672 (-)
Gene ID: opera_contig_95488_109
Type: TC
Location: 113777 - 114361 (-)
Gene ID: opera_contig_95488_110
Type: pfam
Location: 114358 - 114951 (-)
Gene ID: opera_contig_95488_111
Type: TF
Location: 115121 - 116002 (+)
Gene ID: opera_contig_95488_112
Type: TC
Location: 115971 - 117527 (+)
Gene ID: opera_contig_95488_113
Type: CAZyme
Location: 117520 - 121455 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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