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Cluster: SPMP87_bin.22_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_95488 opera_contig_95488_53 59625 60884 + 4.A.3.2.6
TF opera_contig_95488 opera_contig_95488_54 60970 62913 + HTH_11
TC opera_contig_95488 opera_contig_95488_55 62930 63226 + 4.A.3.2.6
pfam opera_contig_95488 opera_contig_95488_56 63241 63978 + PNP_UDP_1
NULL(UNKNOWN) opera_contig_95488 opera_contig_95488_57 64069 64686 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_95488 opera_contig_95488_58 64689 65009 - 4.A.3.2.8
CAZyme opera_contig_95488 opera_contig_95488_59 65025 66353 - GH4
Gene ID: opera_contig_95488_53
Type: TC
Location: 59625 - 60884 (+)
Gene ID: opera_contig_95488_54
Type: TF
Location: 60970 - 62913 (+)
Gene ID: opera_contig_95488_55
Type: TC
Location: 62930 - 63226 (+)
Gene ID: opera_contig_95488_56
Type: pfam
Location: 63241 - 63978 (+)
Gene ID: opera_contig_95488_57
Type:
Location: 64069 - 64686 (-)
Gene ID: opera_contig_95488_58
Type: TC
Location: 64689 - 65009 (-)
Gene ID: opera_contig_95488_59
Type: CAZyme
Location: 65025 - 66353 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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