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Cluster: SPMP87_bin.22_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_95486 opera_contig_95486_266 307449 308291 + 3.A.1.3.27
TC opera_contig_95486 opera_contig_95486_267 308473 309165 + 3.A.1.3.20
TC opera_contig_95486 opera_contig_95486_268 309155 309904 + 3.A.1.3.25
TC opera_contig_95486 opera_contig_95486_269 310088 311977 + 3.A.16.1.1
pfam opera_contig_95486 opera_contig_95486_270 312102 312386 + DUF6809
pfam opera_contig_95486 opera_contig_95486_271 312480 315305 + UvrA_DNA-bind | UvrA_inter
TC opera_contig_95486 opera_contig_95486_272 320961 322478 + 2.A.118.1.8
pfam opera_contig_95486 opera_contig_95486_273 322500 322820 + CdAMP_rec
TC opera_contig_95486 opera_contig_95486_274 322892 323944 + 2.A.20.1.5
pfam opera_contig_95486 opera_contig_95486_275 323971 324594 + PhoU_div
TC opera_contig_95486 opera_contig_95486_276 325164 325607 + 4.A.6.1.14
CAZyme opera_contig_95486 opera_contig_95486_277 325648 326838 + GH88
TC opera_contig_95486 opera_contig_95486_278 326856 327347 + 4.A.6.1.14
TC opera_contig_95486 opera_contig_95486_279 327372 328160 + 4.A.6.1.14
TC opera_contig_95486 opera_contig_95486_280 328150 328959 + 4.A.6.1.14
CAZyme opera_contig_95486 opera_contig_95486_281 329041 331119 + PL12_1
Gene ID: opera_contig_95486_266
Type: TC
Location: 307449 - 308291 (+)
Gene ID: opera_contig_95486_267
Type: TC
Location: 308473 - 309165 (+)
Gene ID: opera_contig_95486_268
Type: TC
Location: 309155 - 309904 (+)
Gene ID: opera_contig_95486_269
Type: TC
Location: 310088 - 311977 (+)
Gene ID: opera_contig_95486_270
Type: pfam
Location: 312102 - 312386 (+)
Gene ID: opera_contig_95486_271
Type: pfam
Location: 312480 - 315305 (+)
Gene ID: opera_contig_95486_272
Type: TC
Location: 320961 - 322478 (+)
Gene ID: opera_contig_95486_273
Type: pfam
Location: 322500 - 322820 (+)
Gene ID: opera_contig_95486_274
Type: TC
Location: 322892 - 323944 (+)
Gene ID: opera_contig_95486_275
Type: pfam
Location: 323971 - 324594 (+)
Gene ID: opera_contig_95486_276
Type: TC
Location: 325164 - 325607 (+)
Gene ID: opera_contig_95486_277
Type: CAZyme
Location: 325648 - 326838 (+)
Gene ID: opera_contig_95486_278
Type: TC
Location: 326856 - 327347 (+)
Gene ID: opera_contig_95486_279
Type: TC
Location: 327372 - 328160 (+)
Gene ID: opera_contig_95486_280
Type: TC
Location: 328150 - 328959 (+)
Gene ID: opera_contig_95486_281
Type: CAZyme
Location: 329041 - 331119 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_95486_268 vegan > omnivore 1.21332 0.02258

🧭 Explore Read Mapping of CGC

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