dbCAN Logo

Cluster: SPMP87_bin.22_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_95486 opera_contig_95486_235 272338 274296 + 3.A.1.5.25
TC opera_contig_95486 opera_contig_95486_236 274300 275250 + 3.A.1.5.25
TC opera_contig_95486 opera_contig_95486_237 275250 276179 + 3.A.1.5.25
TC opera_contig_95486 opera_contig_95486_238 276196 277245 + 3.A.1.5.25
TC opera_contig_95486 opera_contig_95486_239 277252 278187 + 3.A.1.5.25
NULL(UNKNOWN) opera_contig_95486 opera_contig_95486_240 278194 278619 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_95486 opera_contig_95486_241 278753 280369 + 3.A.1.5.27
TC opera_contig_95486 opera_contig_95486_242 280444 281376 + 3.A.1.5.11
TC opera_contig_95486 opera_contig_95486_243 281384 282292 + 3.A.1.5.2
TC opera_contig_95486 opera_contig_95486_244 282307 283299 + 3.A.1.5.20
TC opera_contig_95486 opera_contig_95486_245 283296 284294 + 3.A.1.5.20
pfam opera_contig_95486 opera_contig_95486_246 284380 285465 + MR_MLE_N | MR_MLE_C
peptidase opera_contig_95486 opera_contig_95486_247 285462 286880 + S12.UPW
TC opera_contig_95486 opera_contig_95486_248 287119 289008 + 3.A.1.120.6
peptidase opera_contig_95486 opera_contig_95486_249 289005 290171 + M38.UPW
peptidase opera_contig_95486 opera_contig_95486_250 290341 291219 + S09.UPW
CAZyme opera_contig_95486 opera_contig_95486_251 291266 293632 + PL9_1
Gene ID: opera_contig_95486_235
Type: TC
Location: 272338 - 274296 (+)
Gene ID: opera_contig_95486_236
Type: TC
Location: 274300 - 275250 (+)
Gene ID: opera_contig_95486_237
Type: TC
Location: 275250 - 276179 (+)
Gene ID: opera_contig_95486_238
Type: TC
Location: 276196 - 277245 (+)
Gene ID: opera_contig_95486_239
Type: TC
Location: 277252 - 278187 (+)
Gene ID: opera_contig_95486_240
Type:
Location: 278194 - 278619 (+)
Gene ID: opera_contig_95486_241
Type: TC
Location: 278753 - 280369 (+)
Gene ID: opera_contig_95486_242
Type: TC
Location: 280444 - 281376 (+)
Gene ID: opera_contig_95486_243
Type: TC
Location: 281384 - 282292 (+)
Gene ID: opera_contig_95486_244
Type: TC
Location: 282307 - 283299 (+)
Gene ID: opera_contig_95486_245
Type: TC
Location: 283296 - 284294 (+)
Gene ID: opera_contig_95486_246
Type: pfam
Location: 284380 - 285465 (+)
Gene ID: opera_contig_95486_247
Type: peptidase
Location: 285462 - 286880 (+)
Gene ID: opera_contig_95486_248
Type: TC
Location: 287119 - 289008 (+)
Gene ID: opera_contig_95486_249
Type: peptidase
Location: 289005 - 290171 (+)
Gene ID: opera_contig_95486_250
Type: peptidase
Location: 290341 - 291219 (+)
Gene ID: opera_contig_95486_251
Type: CAZyme
Location: 291266 - 293632 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List