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Cluster: SPMP87_bin.22_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_95484 opera_contig_95484_262 288023 288298 - 9.B.143.3.6
STP opera_contig_95484 opera_contig_95484_263 288469 289878 - Pribosyltran
CAZyme opera_contig_95484 opera_contig_95484_264 290151 291140 + CE8
TF opera_contig_95484 opera_contig_95484_265 291167 292804 + HTH_AraC | HTH_AraC
TC opera_contig_95484 opera_contig_95484_266 292805 294607 + 8.A.59.2.1
STP opera_contig_95484 opera_contig_95484_267 294594 295565 + Peripla_BP_1
TC opera_contig_95484 opera_contig_95484_268 295583 296641 + 3.A.1.2.3
STP opera_contig_95484 opera_contig_95484_269 296808 298010 + Peripla_BP_3
TC opera_contig_95484 opera_contig_95484_270 298108 299610 + 3.A.1.2.3
TC opera_contig_95484 opera_contig_95484_271 299628 300707 + 3.A.1.2.3
Gene ID: opera_contig_95484_262
Type: TC
Location: 288023 - 288298 (-)
Gene ID: opera_contig_95484_263
Type: STP
Location: 288469 - 289878 (-)
Gene ID: opera_contig_95484_264
Type: CAZyme
Location: 290151 - 291140 (+)
Gene ID: opera_contig_95484_265
Type: TF
Location: 291167 - 292804 (+)
Gene ID: opera_contig_95484_266
Type: TC
Location: 292805 - 294607 (+)
Gene ID: opera_contig_95484_267
Type: STP
Location: 294594 - 295565 (+)
Gene ID: opera_contig_95484_268
Type: TC
Location: 295583 - 296641 (+)
Gene ID: opera_contig_95484_269
Type: STP
Location: 296808 - 298010 (+)
Gene ID: opera_contig_95484_270
Type: TC
Location: 298108 - 299610 (+)
Gene ID: opera_contig_95484_271
Type: TC
Location: 299628 - 300707 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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