Cluster: SPMP87_bin.22_CGC14
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP87_bin.22
- CGC Family ID: CGCFAM_04459
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_95485 | opera_contig_95485_79 | 83701 | 84462 | - | 3.A.1.7.5 |
| TC | opera_contig_95485 | opera_contig_95485_80 | 84493 | 85395 | - | 3.A.1.7.5 |
| TC | opera_contig_95485 | opera_contig_95485_81 | 85385 | 86320 | - | 3.A.1.7.5 |
| TC | opera_contig_95485 | opera_contig_95485_82 | 86349 | 87275 | - | 3.A.1.7.5 |
| NULL(UNKNOWN) | opera_contig_95485 | opera_contig_95485_83 | 87482 | 87910 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | opera_contig_95485 | opera_contig_95485_84 | 87926 | 88162 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_95485 | opera_contig_95485_85 | 88298 | 89368 | + | GT28 |
| STP | opera_contig_95485 | opera_contig_95485_86 | 89375 | 89911 | - | Sigma70_r4_2 |
| pfam | opera_contig_95485 | opera_contig_95485_87 | 89920 | 90348 | - | HIT | DcpS_C |
| CAZyme | opera_contig_95485 | opera_contig_95485_88 | 90560 | 92362 | - | CE12 |
| TC | opera_contig_95485 | opera_contig_95485_89 | 92537 | 93814 | + | 9.B.33.1.1 |
| TF | opera_contig_95485 | opera_contig_95485_90 | 93909 | 95405 | + | HTH_AraC |
| TF | opera_contig_95485 | opera_contig_95485_91 | 95402 | 96358 | - | HTH_AraC | HTH_AraC |
| CAZyme | opera_contig_95485 | opera_contig_95485_92 | 96554 | 97957 | + | GH4 |
Gene ID: opera_contig_95485_79
Type: TC
Location: 83701 - 84462 (-)
Type: TC
Location: 83701 - 84462 (-)
Gene ID: opera_contig_95485_80
Type: TC
Location: 84493 - 85395 (-)
Type: TC
Location: 84493 - 85395 (-)
Gene ID: opera_contig_95485_81
Type: TC
Location: 85385 - 86320 (-)
Type: TC
Location: 85385 - 86320 (-)
Gene ID: opera_contig_95485_82
Type: TC
Location: 86349 - 87275 (-)
Type: TC
Location: 86349 - 87275 (-)
Gene ID: opera_contig_95485_83
Type:
Location: 87482 - 87910 (-)
Type:
Location: 87482 - 87910 (-)
Gene ID: opera_contig_95485_84
Type:
Location: 87926 - 88162 (-)
Type:
Location: 87926 - 88162 (-)
Gene ID: opera_contig_95485_85
Type: CAZyme
Location: 88298 - 89368 (+)
Type: CAZyme
Location: 88298 - 89368 (+)
Gene ID: opera_contig_95485_86
Type: STP
Location: 89375 - 89911 (-)
Type: STP
Location: 89375 - 89911 (-)
Gene ID: opera_contig_95485_87
Type: pfam
Location: 89920 - 90348 (-)
Type: pfam
Location: 89920 - 90348 (-)
Gene ID: opera_contig_95485_88
Type: CAZyme
Location: 90560 - 92362 (-)
Type: CAZyme
Location: 90560 - 92362 (-)
Gene ID: opera_contig_95485_89
Type: TC
Location: 92537 - 93814 (+)
Type: TC
Location: 92537 - 93814 (+)
Gene ID: opera_contig_95485_90
Type: TF
Location: 93909 - 95405 (+)
Type: TF
Location: 93909 - 95405 (+)
Gene ID: opera_contig_95485_91
Type: TF
Location: 95402 - 96358 (-)
Type: TF
Location: 95402 - 96358 (-)
Gene ID: opera_contig_95485_92
Type: CAZyme
Location: 96554 - 97957 (+)
Type: CAZyme
Location: 96554 - 97957 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.