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Cluster: SPMP83_bin.60_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_19 opera_contig_19_37 40126 40893 - 1.A.23.4.10
pfam opera_contig_19 opera_contig_19_38 41022 43049 - Metallophos | 5_nucleotid_C
TC opera_contig_19 opera_contig_19_39 43207 44001 - 3.A.1.34.1
TC opera_contig_19 opera_contig_19_40 43994 44917 - 3.A.1.34.1
TC opera_contig_19 opera_contig_19_41 45120 46100 - 3.A.1.34.1
NULL(UNKNOWN) opera_contig_19 opera_contig_19_42 46261 47046 - NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_19 opera_contig_19_43 47296 48699 - tRNA-synt_2 | tRNA_anti-codon
TC opera_contig_19 opera_contig_19_44 48880 49521 - 4.A.1.2.6
peptidase opera_contig_19 opera_contig_19_45 49690 50589 + S09.UPW
NULL(UNKNOWN) opera_contig_19 opera_contig_19_46 50637 50957 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_19 opera_contig_19_47 51079 53439 + 9.A.8.1.6
TC opera_contig_19 opera_contig_19_48 53565 54761 + 2.A.1.2.18
CAZyme opera_contig_19 opera_contig_19_49 54915 56291 + GH13_20
Gene ID: opera_contig_19_37
Type: TC
Location: 40126 - 40893 (-)
Gene ID: opera_contig_19_38
Type: pfam
Location: 41022 - 43049 (-)
Gene ID: opera_contig_19_39
Type: TC
Location: 43207 - 44001 (-)
Gene ID: opera_contig_19_40
Type: TC
Location: 43994 - 44917 (-)
Gene ID: opera_contig_19_41
Type: TC
Location: 45120 - 46100 (-)
Gene ID: opera_contig_19_42
Type:
Location: 46261 - 47046 (-)
Gene ID: opera_contig_19_43
Type: pfam
Location: 47296 - 48699 (-)
Gene ID: opera_contig_19_44
Type: TC
Location: 48880 - 49521 (-)
Gene ID: opera_contig_19_45
Type: peptidase
Location: 49690 - 50589 (+)
Gene ID: opera_contig_19_46
Type:
Location: 50637 - 50957 (+)
Gene ID: opera_contig_19_47
Type: TC
Location: 51079 - 53439 (+)
Gene ID: opera_contig_19_48
Type: TC
Location: 53565 - 54761 (+)
Gene ID: opera_contig_19_49
Type: CAZyme
Location: 54915 - 56291 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_19_38 vegan > omnivore 1.82398 0.00863
opera_contig_19_38 vegetarian > omnivore 1.35808 0.01287

🧭 Explore Read Mapping of CGC

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