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Cluster: SPMP83_bin.60_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_3 opera_contig_3_140 170280 171662 - GH4
TC opera_contig_3 opera_contig_3_141 171666 173282 - 4.A.1.1.3
pfam opera_contig_3 opera_contig_3_142 173382 174236 - PRD | PRD | CAT_RBD
TC opera_contig_3 opera_contig_3_143 174255 174767 - 4.A.1.2.5
STP opera_contig_3 opera_contig_3_144 175111 175872 - Fer4
TC opera_contig_3 opera_contig_3_145 176495 178750 - 1.I.1.1.3
TC opera_contig_3 opera_contig_3_146 179301 181640 + 3.A.3.5.15
Gene ID: opera_contig_3_140
Type: CAZyme
Location: 170280 - 171662 (-)
Gene ID: opera_contig_3_141
Type: TC
Location: 171666 - 173282 (-)
Gene ID: opera_contig_3_142
Type: pfam
Location: 173382 - 174236 (-)
Gene ID: opera_contig_3_143
Type: TC
Location: 174255 - 174767 (-)
Gene ID: opera_contig_3_144
Type: STP
Location: 175111 - 175872 (-)
Gene ID: opera_contig_3_145
Type: TC
Location: 176495 - 178750 (-)
Gene ID: opera_contig_3_146
Type: TC
Location: 179301 - 181640 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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