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Cluster: SPMP83_bin.60_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_104 opera_contig_104_10 11386 12891 + GH77
CAZyme opera_contig_104 opera_contig_104_11 13020 15287 + GT35
TC opera_contig_104 opera_contig_104_12 15743 16942 - 3.A.1.1.22
TC opera_contig_104 opera_contig_104_13 17011 17850 - 3.A.1.1.45
TC opera_contig_104 opera_contig_104_14 17850 18704 - 3.A.1.1.45
TC opera_contig_104 opera_contig_104_15 18792 20108 - 3.A.1.1.45
TF opera_contig_104 opera_contig_104_16 20415 21134 - GntR
TC opera_contig_104 opera_contig_104_17 21359 23809 + 4.A.1.1.8
Gene ID: opera_contig_104_10
Type: CAZyme
Location: 11386 - 12891 (+)
Gene ID: opera_contig_104_11
Type: CAZyme
Location: 13020 - 15287 (+)
Gene ID: opera_contig_104_12
Type: TC
Location: 15743 - 16942 (-)
Gene ID: opera_contig_104_13
Type: TC
Location: 17011 - 17850 (-)
Gene ID: opera_contig_104_14
Type: TC
Location: 17850 - 18704 (-)
Gene ID: opera_contig_104_15
Type: TC
Location: 18792 - 20108 (-)
Gene ID: opera_contig_104_16
Type: TF
Location: 20415 - 21134 (-)
Gene ID: opera_contig_104_17
Type: TC
Location: 21359 - 23809 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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