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Cluster: SPMP83_bin.60_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_24 opera_contig_24_19 22032 22916 - CE7
TC opera_contig_24 opera_contig_24_20 23090 23917 - 3.A.1.5.27
TC opera_contig_24 opera_contig_24_21 23918 25933 - 3.A.1.5.25
TC opera_contig_24 opera_contig_24_22 25937 26893 - 3.A.1.5.38
TC opera_contig_24 opera_contig_24_23 27051 28664 - 3.A.1.5.27
pfam opera_contig_24 opera_contig_24_24 29029 30969 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC opera_contig_24 opera_contig_24_25 30976 32658 - 2.A.66.4.4
Gene ID: opera_contig_24_19
Type: CAZyme
Location: 22032 - 22916 (-)
Gene ID: opera_contig_24_20
Type: TC
Location: 23090 - 23917 (-)
Gene ID: opera_contig_24_21
Type: TC
Location: 23918 - 25933 (-)
Gene ID: opera_contig_24_22
Type: TC
Location: 25937 - 26893 (-)
Gene ID: opera_contig_24_23
Type: TC
Location: 27051 - 28664 (-)
Gene ID: opera_contig_24_24
Type: pfam
Location: 29029 - 30969 (-)
Gene ID: opera_contig_24_25
Type: TC
Location: 30976 - 32658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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