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Cluster: SPMP83_bin.60_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_22 opera_contig_22_31 34845 36014 - CE9
STP opera_contig_22 opera_contig_22_32 36132 37298 - SIS | SIS
TF opera_contig_22 opera_contig_22_33 37413 38144 - GntR
TC opera_contig_22 opera_contig_22_34 38330 39412 - 4.A.6.1.4
TC opera_contig_22 opera_contig_22_35 39402 40202 - 4.A.6.1.4
TC opera_contig_22 opera_contig_22_36 40293 40775 - 4.A.6.1.4
pfam opera_contig_22 opera_contig_22_37 40812 41093 - YajC
TC opera_contig_22 opera_contig_22_38 41093 41536 - 4.A.6.1.16
Gene ID: opera_contig_22_31
Type: CAZyme
Location: 34845 - 36014 (-)
Gene ID: opera_contig_22_32
Type: STP
Location: 36132 - 37298 (-)
Gene ID: opera_contig_22_33
Type: TF
Location: 37413 - 38144 (-)
Gene ID: opera_contig_22_34
Type: TC
Location: 38330 - 39412 (-)
Gene ID: opera_contig_22_35
Type: TC
Location: 39402 - 40202 (-)
Gene ID: opera_contig_22_36
Type: TC
Location: 40293 - 40775 (-)
Gene ID: opera_contig_22_37
Type: pfam
Location: 40812 - 41093 (-)
Gene ID: opera_contig_22_38
Type: TC
Location: 41093 - 41536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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