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Cluster: SPMP83_bin.60_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_22 opera_contig_22_9 8657 8995 - 4.A.3.1.2
TF opera_contig_22 opera_contig_22_10 9210 10214 - LacI
TC opera_contig_22 opera_contig_22_11 10570 12345 + 4.A.3.1.1
CAZyme opera_contig_22 opera_contig_22_12 12412 13851 + GH1
TF opera_contig_22 opera_contig_22_13 14119 15156 - LacI
CAZyme opera_contig_22 opera_contig_22_14 15498 16940 + GH1
TC opera_contig_22 opera_contig_22_15 17117 18754 + 4.A.3.1.1
NULL(UNKNOWN) opera_contig_22 opera_contig_22_16 18755 18877 + NULL(UNKNOWN)
[View Structural Homologs]
TF opera_contig_22 opera_contig_22_17 19291 20301 - LacI
TC opera_contig_22 opera_contig_22_18 20578 22362 + 4.A.3.1.1
CAZyme opera_contig_22 opera_contig_22_19 22438 23859 + GH1
Gene ID: opera_contig_22_9
Type: TC
Location: 8657 - 8995 (-)
Gene ID: opera_contig_22_10
Type: TF
Location: 9210 - 10214 (-)
Gene ID: opera_contig_22_11
Type: TC
Location: 10570 - 12345 (+)
Gene ID: opera_contig_22_12
Type: CAZyme
Location: 12412 - 13851 (+)
Gene ID: opera_contig_22_13
Type: TF
Location: 14119 - 15156 (-)
Gene ID: opera_contig_22_14
Type: CAZyme
Location: 15498 - 16940 (+)
Gene ID: opera_contig_22_15
Type: TC
Location: 17117 - 18754 (+)
Gene ID: opera_contig_22_16
Type:
Location: 18755 - 18877 (+)
Gene ID: opera_contig_22_17
Type: TF
Location: 19291 - 20301 (-)
Gene ID: opera_contig_22_18
Type: TC
Location: 20578 - 22362 (+)
Gene ID: opera_contig_22_19
Type: CAZyme
Location: 22438 - 23859 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_22_16 vegan > omnivore 1.22247 0.00863
opera_contig_22_16 vegetarian > omnivore 1.45177 0.01459

🧭 Explore Read Mapping of CGC

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