Cluster: SPMP72_bin.44_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_03394
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_125215 | opera_contig_125215_71 | 66911 | 67918 | + | GH25 |
| pfam | opera_contig_125215 | opera_contig_125215_72 | 67928 | 68422 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | opera_contig_125215 | opera_contig_125215_73 | 68546 | 68773 | + | 3.D.1.6.3 |
| TC | opera_contig_125215 | opera_contig_125215_74 | 68801 | 69280 | - | 2.A.88.9.2 |
| pfam | opera_contig_125215 | opera_contig_125215_75 | 69485 | 70273 | + | Big_2 | YARHG |
| TC | opera_contig_125215 | opera_contig_125215_76 | 70629 | 71933 | + | 4.A.3.2.9 |
Gene ID: opera_contig_125215_71
Type: CAZyme
Location: 66911 - 67918 (+)
Type: CAZyme
Location: 66911 - 67918 (+)
Gene ID: opera_contig_125215_72
Type: pfam
Location: 67928 - 68422 (-)
Type: pfam
Location: 67928 - 68422 (-)
Gene ID: opera_contig_125215_73
Type: TC
Location: 68546 - 68773 (+)
Type: TC
Location: 68546 - 68773 (+)
Gene ID: opera_contig_125215_74
Type: TC
Location: 68801 - 69280 (-)
Type: TC
Location: 68801 - 69280 (-)
Gene ID: opera_contig_125215_75
Type: pfam
Location: 69485 - 70273 (+)
Type: pfam
Location: 69485 - 70273 (+)
Gene ID: opera_contig_125215_76
Type: TC
Location: 70629 - 71933 (+)
Type: TC
Location: 70629 - 71933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125215_73 | vegan > omnivore | 5.68071 | 0.00191 |
| opera_contig_125215_74 | vegan > omnivore | 1.09132 | 0.00191 |