Cluster: SPMP72_bin.44_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_125215 | opera_contig_125215_34 | 35198 | 35860 | + | GT2 |
| CAZyme | opera_contig_125215 | opera_contig_125215_35 | 36177 | 36497 | + | GT2 |
| NULL(UNKNOWN) | opera_contig_125215 | opera_contig_125215_36 | 36612 | 37031 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_125215 | opera_contig_125215_37 | 37045 | 37638 | + | 2.A.66.2.16 |
| TC | opera_contig_125215 | opera_contig_125215_38 | 37736 | 38491 | + | 2.A.66.2.16 |
| pfam | opera_contig_125215 | opera_contig_125215_39 | 38556 | 39395 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | opera_contig_125215 | opera_contig_125215_40 | 39487 | 40449 | + | GT2 |
| CAZyme | opera_contig_125215 | opera_contig_125215_41 | 40459 | 41373 | + | GT2 |
Gene ID: opera_contig_125215_34
Type: CAZyme
Location: 35198 - 35860 (+)
Type: CAZyme
Location: 35198 - 35860 (+)
Gene ID: opera_contig_125215_35
Type: CAZyme
Location: 36177 - 36497 (+)
Type: CAZyme
Location: 36177 - 36497 (+)
Gene ID: opera_contig_125215_36
Type:
Location: 36612 - 37031 (+)
Type:
Location: 36612 - 37031 (+)
Gene ID: opera_contig_125215_37
Type: TC
Location: 37045 - 37638 (+)
Type: TC
Location: 37045 - 37638 (+)
Gene ID: opera_contig_125215_38
Type: TC
Location: 37736 - 38491 (+)
Type: TC
Location: 37736 - 38491 (+)
Gene ID: opera_contig_125215_39
Type: pfam
Location: 38556 - 39395 (+)
Type: pfam
Location: 38556 - 39395 (+)
Gene ID: opera_contig_125215_40
Type: CAZyme
Location: 39487 - 40449 (+)
Type: CAZyme
Location: 39487 - 40449 (+)
Gene ID: opera_contig_125215_41
Type: CAZyme
Location: 40459 - 41373 (+)
Type: CAZyme
Location: 40459 - 41373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125215_39 | vegan > omnivore | 1.47750 | 0.00191 |